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BI Server and internal repository server?

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Hi,
In official documentation (https://help.pentaho.com/Documentation/6.1/0F0/0M0) there is information that default installation provide Postgres database and this database is used as a Pentaho repository server.
I've downloaded BI Server from http://community.pentaho.com/ but it uses some internal databes? Am I right if yes should I change to different database how to do this I cannot find documentation how to change repository server.
What about application server does it use Tomcat or I also should change to Tomcat?

Regards
Michał Szymański

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